Savvas Paragkamian

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Publications Publications

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Personal Information

Savvas Paragkamian

Previous Members

Microbial ecology

HCMR Thalassocosmos 71500 Gournes, Crete, Greece

s.paragkamian@hcmr.gr

Field & Degree

Complex Systems Biology, MSc

Section

Biodiversity & Genetics

Location

Main Building

Office

041

Secondary E-mail

s.paragkamian@gmail.com

Mobile Number

+306934008102

ORCID iD

https://orcid.org/0000-0002-8508-2521

Researcher ID

https://www.researchgate.net/profile/Savvas_Paragkamian

Linked iN

https://www.linkedin.com/in/savvas-paragkamian-741538182/

Gender Male | Date of birth 1992/01/27

Scientific impact

Publication record

Education & training

Year (completed)	Degree, Department, University, Town (optional), Country
2017	Inter-faculty Master Program on Complex Systems and Networks, Aristotle University, Thessaloniki (Greece)
2015	Undergraduate studies in Biology, University of Crete, Irakleion (Greece)

Work Experience

Year (start)	Position – Organization, Town (optional), Country
2020	PhD Candidate in Biodiversity Section in HCMR, PREGO project
2018	Assistant photographer, Heinz Troll Photography, Thessaloniki, Greece
2017	Development of Cave Fauna of Greece (CFG) Database - INSPEE, Heraklion, Greece
2022	Raptor birds catching from nests on cliffs using rope access techniques. Bonelli’s eagle, Golden eagle and Gypaetus barbatus. Host Institution: Natural History Museum of Crete

Personal skills

Mother tongue(s)

Greek

Other language(s)

Language	Basic/Intermediate/Proficient
English	Proficient
French	Basic

Computer skills

Unix, Mac, Linux, Windows, R programming, Bash, Latex, Git

Other skills

Certified instructor (moniteur) in canyoning by the French Federation of Speleology. Caving explorer and instructor. Advanced Scuba Open Water Diver. Speedboat operator (Hellenic Coast Guard). Certified Unmanned aerial vehicles operator (A1-A2-A3).

Conferences-Symposia

Savvas Paragkamian et al.. From Micro to Macro, Defining Crete’s Macroecology based on its soil Microbial Interactome. 10th International Conference of MIKROBIOKOSMOS. Larisa, Greece, 12/2023

Savvas Paragkamian. Integrating data and methods: what can we learn about the soil ecosystems of Crete. EMBO Satellite Workshop on Ecology Informatics. Irakleio, Greece, 5/2023

Savvas Paragkamian, Haris Zafeiropoulos, Stylianos Ninidakis, Georgios A. Pavlopoulos, Lars Juhl Jensen, Evangelos Pafilis (2021). PREGO (Process, Environment, Organism), mining lit- erature and -omics (meta)data to associate microorganisms, biological processes, and envi- ronment types. 9th International Conference of MIKROBIOKOSMOS, Athens, Greece, 16-19 December 2021

Haris Zafeiropoulos, Savvas Paragkamian, Christina Pavloudi, George Tsamis, Stylianos Ninidakis, Ioulia Santi, Georgios A. Pavlopoulos, Lars Juhl Jensen, Evangelos Pafilis (2021). PREGO (Process, Environment, Organism), mining literature and -omics (meta)data to as- sociate microorganisms, biological processes, and environment types. WORLD MICROBE FORUM, 20-14 JUNE 2021. POSTER ID:WMF21-0899

Haris Zafeiropoulos, Savvas Paragkamian, Christina Pavloudi, George Tsamis, Stylianos Ninidakis, Ioulia Santi, Georgios A. Pavlopoulos, Lars Juhl Jensen, Evangelos Pafilis (2020). Mining literature and -omics (meta)data to associate microorganisms, biological processes, and environment types. FEMS ONLINE CONFERENCE ON MICROBIOLOGY 28-31 October 2020.

Paragamian K., Paragkamian S. (2018). Diversity and conservation of the cave fauna of Crete (Greece). International Conference on Subterranean Biology, 20-24th August 2018, University of Aveiro, Portugal. ARPHA Conference Abstracts 1: e29836. https://doi.org/10.3897/ aca.1.e29836

Paragamian K., Poulinakis M., Paragkamian S. and Nikoloudakis I. (2018). A comprehensive database for the cave fauna of Greece. 24th International Conference on Subterranean Biology, 20-24th August 2018, University of Aveiro, Portugal. ARPHA Conference Abstracts 1: e29843.https://doi.org/10.3897/aca.1.e29843

Paragkamian S., Nikolaou, C., Sgardelis S. and Antoniou I. (2017). The centrality–lethality rule in signed protein interaction networks. In Hellenic Bioinformatics 10th Conference. 6–9 September 2017, Forth, Irakleio, Greece. DOI: https://doi.org/10.13140/RG.2.2.32339. 63520

Batziou, E., Gravanis, M., Karadimos, P., Koulikas, D., Mpatziakas, A., Paragkamian S., Xan- thopoulou, G. (2016). Comparison of correlation measures for deletion of brain network con- nectivity alterations during epileptiform discharges. Proceedings of the 29th Greek Statistical conference (pp. 30– 46). Naousa: Hellenic Statistical Institute

Paragkamian S. and Nikolaou, C. (2015). Menzerath – Altmann ’ s law in human gene families at the gene - exon level and their evolutionary history. In 10th Conference of the Hellenic Society for Computational Biology and Bioinformatics. 9-11 October 2015, Athens, Greece. DOI: http://dx.doi.org/10.13140/RG.2.2.25628.74886

Services

Membership of scientific societies

MIKROBIOKOSMOS - Hellenic Scientific Society

International Society for Subterranean Biology

Awards & distinctions

Dawn Field Award 2024 for Outstanding Contributions to Genomic Standards by the Genome Standards Consortium for my contributions to the genomics and island microbiome research communities.

2022 - 3rd call for Doctorate Scholarships (no. 5726). Hellenic Foundation for Research and Innovation and General Secretariat for Research and Innovation