Tereza Manousaki

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2021

Mladineo, Ivona; Hrabar, Jerko; Trumbić, Željka; Manousaki, Tereza; Tsakogiannis, Alexandros; Taggart, John B; Tsigenopoulos, Costas S

Community Parameters and Genome-Wide RAD-Seq Loci of Ceratothoa oestroides Imply Its Transfer between Farmed European Sea Bass and Wild Farm-Aggregating Fish Journal Article

Pathogens, 10 (2), pp. 100, 2021, ISSN: 2076-0817.

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2020

Tsakogiannis, Alexandros; Manousaki, Tereza; Anagnostopoulou, Vasileia; Stavroulaki, Melanthia; Apostolaki, Eugenia T

The Importance of Genomics for Deciphering the Invasion Success of the Seagrass Halophila stipulacea in the Changing Mediterranean Sea Journal Article

Diversity, 12 (7), 2020, ISSN: 1424-2818.

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Blakeslee, April M H; Manousaki, Tereza; Vasileiadou, Katerina; Tepolt, Carolyn K

An evolutionary perspective on marine invasions Journal Article

Evolutionary Applications, 13 (3), pp. 479–485, 2020, (_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/eva.12906).

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Koutsouveli, Vasiliki; Manousaki, Tereza; Riesgo, Ana; Lagnel, Jacques; Kollias, Spyros; Tsigenopoulos, Costas S; Arvanitidis, Christos; Dounas, Costas; Magoulas, Antonios; Dailianis, Thanos

Gearing Up for Warmer Times: Transcriptomic Response of Spongia officinalis to Elevated Temperatures Reveals Recruited Mechanisms and Potential for Resilience Journal Article

Frontiers in Marine Science, 6 , pp. 786, 2020, ISSN: 2296-7745.

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2019

Manousaki, Tereza; Koutsouveli, Vasiliki; Lagnel, Jacques; Kollias, Spyridon; Tsigenopoulos, Costas S; Arvanitidis, Christos; Magoulas, Antonios; Dounas, Costas; Dailianis, Thanos

A de novo transcriptome assembly for the bath sponge Spongia officinalis, adjusting for microsymbionts Journal Article

BMC Research Notes, 12 (1), pp. 813, 2019, ISSN: 1756-0500.

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Natsidis, Paschalis; Tsakogiannis, Alexandros; Pavlidis, Pavlos; Tsigenopoulos, Costas S; Manousaki, Tereza

Phylogenomics investigation of sparids (Teleostei: Spariformes) using high-quality proteomes highlights the importance of taxon sampling Journal Article

Communications Biology, 2 (1), pp. 400, 2019, ISSN: 2399-3642.

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Kyriakis, Dimitrios; Kanterakis, Alexandros; Manousaki, Tereza; Tsakogiannis, Alexandros; Tsagris, Michalis; Tsamardinos, Ioannis; Papaharisis, Leonidas; Chatziplis, Dimitris; Potamias, George; Tsigenopoulos, Costas S

Scanning of Genetic Variants and Genetic Mapping of Phenotypic Traits in Gilthead Sea Bream Through ddRAD Sequencing Journal Article

Frontiers in Genetics, 10 , pp. 675, 2019, ISSN: 1664-8021.

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2018

Pauletto, Marianna; Manousaki, Tereza; Ferraresso, Serena; Babbucci, Massimiliano; Tsakogiannis, Alexandros; Louro, Bruno; Vitulo, Nicola; Quoc, Viet Ha; Carraro, Roberta; Bertotto, Daniela; Franch, Rafaella; Maroso, Francesco; Aslam, Muhammad L; Sonesson, Anna K; Simionati, Barbara; Malacrida, Giorgio; Cestaro, Alessandro; Caberlotto, Stefano; Sarropoulou, Elena; Mylonas, Costantinos C; Power, Deborah M; Patarnello, Tomaso; Canario, Adelino V M; Tsigenopoulos, Costas; Bargelloni, Luca

Genomic analysis of Sparus aurata reveals the evolutionary dynamics of sex-biased genes in a sequential hermaphrodite fish Journal Article

Communications Biology, 1 (1), pp. 119, 2018, ISSN: 2399-3642.

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Tsakogiannis, Alexandros; Manousaki, Tereza; Lagnel, Jacques; Papanikolaou, Nikolaos; Papandroulakis, Nikos; Mylonas, Constantinos C; Tsigenopoulos, Costas S

The gene toolkit implicated in functional sex in Sparidae hermaphrodites: inferences from comparative transcriptomics Journal Article

Frontiers in Genetics, 9 , pp. 749, 2018, (Publisher: Frontiers).

BibTeX

2017

Lee, Hyuk Je; Schneider, Ralf F; Manousaki, Tereza; Kang, Ji Hyoun; Lein, Etienne; Franchini, Paolo; Meyer, Axel

Lateralized feeding behavior is associated with asymmetrical neuroanatomy and lateralized gene expressions in the brain in scale-eating cichlid fish Journal Article

Genome biology and evolution, 9 (11), pp. 3122–3136, 2017, (Publisher: Oxford University Press).

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2016

Braasch, Ingo; Gehrke, Andrew R; Smith, Jeramiah J; Kawasaki, Kazuhiko; Manousaki, Tereza; Pasquier, Jeremy; Amores, Angel; Desvignes, Thomas; Batzel, Peter; Catchen, Julian; Berlin, Aaron M; Campbell, Michael S; Barrell, Daniel; Martin, Kyle J; Mulley, John F; Ravi, Vydianathan; Lee, Alison P; Nakamura, Tetsuya; Chalopin, Domitille; Fan, Shaohua; Wcisel, Dustin; Cañestro, Cristian; Sydes, Jason; Beaudry, Felix E G; Sun, Yi; Hertel, Jana; Beam, Michael J; Fasold, Mario; Ishiyama, Mikio; Johnson, Jeremy; Kehr, Steffi; Lara, Marcia; Letaw, John H; Litman, Gary W; Litman, Ronda T; Mikami, Masato; Ota, Tatsuya; Saha, Nil Ratan; Williams, Louise; Stadler, Peter F; Wang, Han; Taylor, John S; Fontenot, Quenton; Ferrara, Allyse; Searle, Stephen M J; Aken, Bronwen; Yandell, Mark; Schneider, Igor; Yoder, Jeffrey A; Volff, Jean-Nicolas; Meyer, Axel; Amemiya, Chris T; Venkatesh, Byrappa; Holland, Peter W H; Guiguen, Yann; Bobe, Julien; Shubin, Neil H; Palma, Federica Di; Alföldi, Jessica; Lindblad-Toh, Kerstin; Postlethwait, John H

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons Journal Article

Nature Genetics, 48 (4), pp. 427–437, 2016, ISSN: 1061-4036, 1546-1718.

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Manousaki, Tereza; Qiu, Huan; Noro, Miyuki; Hildebrand, Falk; Meyer, Axel; Kuraku, Shigehiro

Molecular evolution in the lamprey genomes and its relevance to the timing of whole genome duplications Incollection

Jawless Fishes of the World, 1 , Cambridge Scholars, 2016.

BibTeX

Manousaki, Tereza; Tsakogiannis, Alexandros; Taggart, John B; Palaiokostas, Christos; Tsaparis, Dimitris; Lagnel, Jacques; Chatziplis, Dimitrios; Magoulas, Antonios; Papandroulakis, Nikos; Mylonas, Constantinos C; others,

Exploring a nonmodel teleost genome through rad sequencing—linkage mapping in Common Pandora, Pagellus erythrinus and comparative genomic analysis Journal Article

G3: Genes, genomes, genetics, 6 (3), pp. 509–519, 2016, (Publisher: G3: Genes, Genomes, Genetics).

BibTeX

2015

Kang, Ji Hyoun; Manousaki, Tereza; Franchini, Paolo; Kneitz, Susanne; Schartl, Manfred; Meyer, Axel

Transcriptomics of two evolutionary novelties: how to make a sperm-transfer organ out of an anal fin and a sexually selected “sword” out of a caudal fin Journal Article

Ecology and Evolution, 5 (4), pp. 848–864, 2015, ISSN: 20457758.

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2014

Manousaki, Tereza; Tsakogiannis, Alexandros; Lagnel, Jacques; Sarropoulou, Elena; Xiang, Jenny Z; Papandroulakis, Nikos; Mylonas, Constantinos C; Tsigenopoulos, Costas S

The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo) Journal Article

BMC genomics, 15 (1), pp. 655, 2014, (Publisher: BioMed Central).

BibTeX

2013

Amemiya, Chris T; Alföldi, Jessica; Lee, Alison P; Fan, Shaohua; Philippe, Hervé; MacCallum, Iain; Braasch, Ingo; Manousaki, Tereza; Schneider, Igor; Rohner, Nicolas; Organ, Chris; Chalopin, Domitille; Smith, Jeramiah J; Robinson, Mark; Dorrington, Rosemary A; Gerdol, Marco; Aken, Bronwen; Biscotti, Maria Assunta; Barucca, Marco; Baurain, Denis; Berlin, Aaron M; Blatch, Gregory L; Buonocore, Francesco; Burmester, Thorsten; Campbell, Michael S; Canapa, Adriana; Cannon, John P; Christoffels, Alan; Moro, Gianluca De; Edkins, Adrienne L; Fan, Lin; Fausto, Anna Maria; Feiner, Nathalie; Forconi, Mariko; Gamieldien, Junaid; Gnerre, Sante; Gnirke, Andreas; Goldstone, Jared V; Haerty, Wilfried; Hahn, Mark E; Hesse, Uljana; Hoffmann, Steve; Johnson, Jeremy; Karchner, Sibel I; Kuraku, Shigehiro; Lara, Marcia; Levin, Joshua Z; Litman, Gary W; Mauceli, Evan; Miyake, Tsutomu; Mueller, Gail M; Nelson, David R; Nitsche, Anne; Olmo, Ettore; Ota, Tatsuya; Pallavicini, Alberto; Panji, Sumir; Picone, Barbara; Ponting, Chris P; Prohaska, Sonja J; Przybylski, Dariusz; Saha, Nil Ratan; Ravi, Vydianathan; Ribeiro, Filipe J; Sauka-Spengler, Tatjana; Scapigliati, Giuseppe; Searle, Stephen M J; Sharpe, Ted; Simakov, Oleg; Stadler, Peter F; Stegeman, John J; Sumiyama, Kenta; Tabbaa, Diana; Tafer, Hakim; Turner-Maier, Jason; van Heusden, Peter; White, Simon; Williams, Louise; Yandell, Mark; Brinkmann, Henner; Volff, Jean-Nicolas; Tabin, Clifford J; Shubin, Neil; Schartl, Manfred; Jaffe, David B; Postlethwait, John H; Venkatesh, Byrappa; Palma, Federica Di; Lander, Eric S; Meyer, Axel; Lindblad-Toh, Kerstin

The African coelacanth genome provides insights into tetrapod evolution Journal Article

Nature, 496 (7445), pp. 311–316, 2013, ISSN: 0028-0836, 1476-4687.

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Manousaki, Tereza; Hull, Pincelli M; Kusche, Henrik; Machado-Schiaffino, Gonzalo; Franchini, Paolo; Harrod, Chris; Elmer, Kathryn R; Meyer, Axel

Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped M idas cichlid fishes from N icaragua Journal Article

Molecular Ecology, 22 (3), pp. 650–669, 2013.

Abstract | Links | BibTeX

Smith, Jeramiah J; Kuraku, Shigehiro; Holt, Carson; Sauka-Spengler, Tatjana; Jiang, Ning; Campbell, Michael S; Yandell, Mark D; Manousaki, Tereza; Meyer, Axel; Bloom, Ona E; others,

Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution Journal Article

Nature Genetics, 45 (4), pp. 415–421, 2013, (Publisher: Nature Publishing Group).

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2011

Manousaki, Tereza; Feiner, Nathalie; Begemann, Gerrit; Meyer, Axel; Kuraku, Shigehiro

Co-orthology of P ax4 and P ax6 to the fly eyeless gene: molecular phylogenetic, comparative genomic, and embryological analyses Journal Article

Evolution & Development, 13 (5), pp. 448–459, 2011.

Abstract | Links | BibTeX

Dessimoz, Christophe; Zoller, Stefan; Manousaki, Tereza; Qiu, Huan; Meyer, Axel; Kuraku, Shigehiro

Comparative genomics approach to detecting split-coding regions in a low-coverage genome: lessons from the chimaera Callorhinchus milii (Holocephali, Chondrichthyes) Journal Article

Briefings in Bioinformatics, 12 (5), pp. 474–484, 2011, (Publisher: Oxford University Press).

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