Alexandros Tsakogiannis

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Personal InformationAlexandros Tsakogiannis
Previous Members

HCMR Thalassocosmos 71500 Gournes, Crete, Greece

2810 337717

tsakalex@hcmr.gr

Field & DegreeBiology, PhD
SectionBiodiversity & Genetics
LocationMain Building
Office015
ORCID iD0000-0002-1062-6459
Researcher IDAlexandros Tsakogiannis
ResearchGate IDAlexandros_Tsakogiannis
Linked iNalexandros-tsakogiannis-3090336a
Gender Male | Date of birth 1986/06/30
Scientific impact
Publication recordNo of ProjectsThesis supervision
H-index (scopus): 5
Articles: 11
Citations-total: 115Project member: 9BSc: 6
Education & training
Year (completed) Degree, Department, University, Town (optional), Country
2018PhD, Biology, University of Crete, Herakleion, Greece
2011MScRes, Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece
2008BSc.Hons., Biology, University of Crete, Herakleion, Greece
Work Experience
Year (start) Position – Organization, Town (optional), Country
2018Postdoctoral Researcher
2016Research Fellow- H.C.M.R.
2012PhD scholarship-H.C.M.R./University of Crete
Personal skills
Mother tongue(s)Greek
Other language(s)
Language Basic/Intermediate/Proficient
EnglishProficient
Computer skills Linux/Unix powerful user. Experience in working in a cluster environment. Use of programming language Python. Use and on-going training in programming language ‘R’. Experience in Next-generation data analysis (RNA-seq data, RAD data)
Other skills Scuba Diving, Thai Yoga Massage
Educational activities
Teaching experience

2008- 2009: Private after school tutorials to students of secondary school and high school (Maths, Physics, Chemistry) and also specialisation Chemistry and Biology (last class of high school) for University entry exams in Sciences school and Life Sciences School.

2009: Tutorials of Organic Chemistry and Biochemistry to 2nd and 3rd year University Pharmacology students and also of Ergophysiology to Sport Science students.

2008-2009: Tutor in after school tutorials- school “PROTYPO”, Thessaloniki, Greece.

2009: Active training for secondary education teachers, also open to secondary education students: Tsakogiannis A., Krigas N. “Sperm Banks: a modern ark- From seed to fruit and from fruit to seed, life starts all-over again”. Interactive training seminar for people in education with title “An insight of educating about sustainability through of Greek flora”, under instructions of Centre of environmental education of Neapolis and registered office of secondary Education of Neapolis, Crete.

Supervision
Practicals

Supervisor of 6 summer internship students.

Conferences-Symposia

2019: Marine Connectivity Conference 2019, September 23-25: Invasion of Halophila
stipulacea in a warming Mediterranean Sea: Preliminary assessment of ecological and genetic
structure” (oral presentation)
2018: EAS, AQUA 2018:
a. PARENTAGE ASSIGNMENT USING MICROSATELLITE LOCI IN A PROJECT FOR
AQUACULTURE OF MEAGRE Argyrosomus regius. Orestis Nousias, Alexandros Tsakogiannis,
Kostas Tzokas, Javier Villa, Alicia Estevez, Neil Duncan, Costas S. Tsigenopoulos (poster)
b. QTL MAPPING FOR BODY WEIGHT IN EARLY GROWTH STAGES OF COMMON DENTEX Dentex
dentex. Christina Kriaridou, Alexandros Tsakogiannis, Tereza Manousaki, Stavroula Oikonomou,
Nikos Papandroulakis, Constantinos C. Mylonas, Dimitrios Chatziplis, Costas S. Tsigenopoulos
(poster)
2017: 8th European Coastal Lagoons Symposium: GENETIC DIVERSITY PATTERNS OF
MACROBENTHIC COMMUNITIES IN TRANSITIONAL WATER ECOSYSTEMS. Vasileiadou K.,
Manousaki T., Tsakogiannis A., Tsigenopoulos C., Arvanitidis C. (oral presentation)
2016: Aquaculture Europe 2016, September 20-23 2016, Edinburgh, Scotland, ΗΒ:
a. Linkage Mapping In Four Sparidae Species And Comparative Genomic Analyses Set A New
Baseline On Sparidae Aquaculture Genomics. T. Manousaki, A. Tsakogiannis, J.B. Taggart, J.
Lagnel, J. Kristoffersen, N. Papandroulakis, C.C. Mylonas and C.S. Tsigenopoulos (oral
presentation)
b. Transcriptome Exploration And Screening For Sex-Biased Differences In Three Sparids:
Common Pandora, Red Porgy And Common Dentex. A. Tsakogiannis, T. Manousaki, J. Lagnel, M.
Pavlidis, A. Sterioti, N. Papandroulakis, C. C. Mylonas and C. S. Tsigenopoulos (poster)
2015: Aquaculture 2015, August 23-26 2015, Montpellier, France:
a. A genetic linkage map and comparative genomic analysis in sharpsnout seabream, Diplodus
puntazzo. Manousaki T., Tsakogiannis A., Tsaparis D., Papandroulakis N., Mylonas C.C. &
Tsigenopoulos C.S. (Oral 5.13, Β5.4).
b. Transcriptome-wide expression differences in male and female fish of the protogynous
hermaphrodite common pandora, Pagellus erythrinus. Tsakogiannis A., Manousaki T., Lagnel J.,
Papandroulakis N., Mylonas C.C. & Tsigenopoulos C.S. (poster 5.14, P2.61).
2015: XV European Society for Evolutionary Biology (ESEB) Meeting, August 10-14
2015, Lausane, Switzerland:
a. Exploring the genome of Sparidae: linkage mapping in common pandora, Pagellus
erythrinus. Manousaki T., Tsakogiannis A., Taggart J.Β., Palaiokostas C., Tsaparis D., Chatziplis D.,
Papandroulakis N., Mylonas C.C. & Tsigenopoulos C.S. (poster 5.11, Symposium 15. Evolution of
genomes, P.141).
b. Sex related transcriptomic differences of the protogynous hermaphrodite red porgy, Pagrus
pagrus. Tsakogiannis A., Manousaki T., Lagnel J., Papandroulakis N., Mylonas C.C. &
Tsigenopoulos C.S. (poster 5.12, Symposium 1. Ecology and the Evolution of Sex, P.119).
2015: ISGA XII - The International Symposium On Genetics In Aquaculture, June 21-
27 2015, Santiago De Compostela, Spain:
Turning Aquacultured Teleosts To Model Species: Linkage Map Contruction For Red
Porgy Pagrus pagrus Using Rad Sequencing. Tsakogiannis A., Manousaki T., Tsaparis D.,
Papandroulakis N., Mylonas C.C., Tsigenopoulos C.S. (poster 5.10).
2014: Aquaculture Europe 2014, 14-17 October 2014, Donostia–San Sebastián, Spain:
a. Relative female/male participation in the spawning period and differential mortality during
rearing in red porgy (Pagrus pagrus) and common pandora (Pagellus erythrinus) inferred
through microsatellite parentage assignment. Tsakogiannis A., T. Manousaki, V. Terzoglou, K.
Economaki, I. Sigelaki, N. Papandroulakis, C.C. Mylonas and C.S. Tsigenopoulos.
b. The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus
puntazzo). Manousaki Τ, Tsakogiannis Α, Lagnel J, Sarropoulou E, Xiang JZ, Papandroulakis N,
Mylonas CC and Tsigenopoulos CS.
2014: International Conference on Sex Determination and Differentiation in Fishes- Genes,
Environment and Behaviour, 23-24 September 2014, Lisbon, Portugal: The sex-specific
transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo). A.
Tsakogiannis, T. Manousaki, J. Lagnel, E. Sarropoulou, J. Z. Xiang, N. Papandroulakis, C. C.
Mylonas and C. S. Tsigenopoulos.
2014: ΕMBO Practical Course on Genotype to Phenotype Mapping of Complex Traits, 28
July- 2 August 2014, Hinxton Cambridge, ΗΒ: Genetic mapping in Common pandora, Pagellus
erythrinus. Manousaki T, A Tsakogiannis, C Palaiokostas, N Papandroulakis, CC Mylonas, JB
Taggart and CS Tsigenopoulos.
2014: 10th International Symposium on the Reproductive Physiology of Fish, 26-30 Μay
2014, Olhão, Portugal: Parentage assignment and relative female/male participation in the
spawning period and differential mortality during rearing in red porgy, Pagrus pagrus and
common pandora, Pagellus erythrinus). Tsakogiannis A., Manousaki T., Terzoglou V., Economaki
K., Sigelaki E., Papandroulakis N., Mylonas C.C., Tsigenopoulos C.S.
2013: Genomics in Aquaculture (GIA) 2013, 4-6 September, Bodo, Norway: Characterizing
sex-specific transcriptomic signatures in the sharpsnout seabream. Manousaki, T., Tsakogiannis,
A., Sarropoulou, E., Lagnel, J., Xiang, J.Z., Papandroulakis, N., Mylonas, C.C., Tsigenopoulos, C.S..
2013: Genomics in Aquaculture (GIA) 2013, 4-6 September, Bodo, Norway: Setting the
basis for QTL and comparative genomics analysis in two Sparid species (Pagrus pagrus and
Pagellus erythrinus): determination of the relative female/male participation in the spawning
period and differential mortality in a grow-out. Tsakogiannis, A., Manousaki, T., Terzoglou, V.,
Economaki, K., Sigelaki, E., Papandroulakis, N., Mylonas, C.C., Tsigenopoulos, C.S.
2011: 5th International Conference in Biogeography, Heraklion, Crete, Greece, January
2011: GENETIC MONITORING OF ΤΗΕ RED DEER POPULATION ( Cervus elaphus ) OF MOUNTAIN
PARNITHA. Tsakogiannis A., Papika S., Latsoudis P., Pantis J., Abatzopoulos T.J., Triantaphyllidis
K., Triantafyllidis A.
2011: 3rd Conference of Hellenic Society for Computational Biology and Bioinformatics,
CERTH, Thessaloniki, May 2011: GENE ORDER CONSERVATION STUDIES IN THREE
PYROCOCCUS SPECIES. Alexandros Tsakogiannis, Nikolas Papanikolaou, Vasilis J. Promponas
and Ioannis Iliopoulos
2010: 32nd Scientific Conference of the Hellenic Society of Biological Sciences (EEBE)
(Karpenisi, Greece)

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